Publications

ZORA Publication List

Publications

• 2025

  • Journal Article

    • Gries, Alexandre; Santhana Kumar, Karthiga; Kuttler, Fabien; Özalp, Özgün; Akle, Veronica; Zhang, Hanqing; Grotzer, Michael A; Neuhauss, Stephan C F; Allalou, Amin; Baumgartner, Martin (2025). Aurora kinase B is required for growth and expansion of medulloblastoma cells in the tissue context. Neoplasia, 59:101078.

• 2024

  • Journal Article

    • Haug, Marion; Haddad-Velioglu, Sara A; Berger, Manuela; Enz, Anjsa; Zang, Jingjing; Neuhauss, Stephan C F (2024). Differential Localization and Functional Roles of mGluR6 Paralogs in Zebrafish Retina. Investigative Ophthalmology & Visual Science, 65(12):44.
    • Niklaus, Stephanie; Glasauer, Stella M K; Kovermann, Peter; Farshori, Kulsum F; Cadetti, Lucia; Früh, Simon; Rieser, Nicolas N; Gesemann, Matthias; Zang, Jingjing; Fahlke, Christoph; Neuhauss, Stephan C F (2024). Glutamate transporters are involved in direct inhibitory synaptic transmission in the vertebrate retina. Open Biology, 14(7):240140.
    • Marchese, Maria; Bernardi, Sara; Ogi, Asahi; Licitra, Rosario; Silvi, Giada; Mero, Serena; Galatolo, Daniele; Gammaldi, Nicola; Doccini, Stefano; Ratto, Gian Michele; Rapposelli, Simona; Neuhauss, Stephan C F; Zang, Jingjing; Rocchiccioli, Silvia; Michelucci, Elena; Ceccherini, Elisa; Santorelli, Filippo M (2024). Targeting autophagy impairment improves the phenotype of a novel CLN8 zebrafish model. Neurobiology of Disease, 197:106536.
    • Zhang, Zhiyuan; Cao, Yilin; Caviglia, Sara; Agrawal, Prajwal; Neuhauss, Stephan C F; Ahmed, Daniel (2024). A vibrating capillary for ultrasound rotation manipulation of zebrafish larvae. Lab on a chip, 24(4):764-775.
    • Voigt, Fabian F; Reuss, Anna Maria; Naert, Thomas; Hildebrand, Sven; Schaettin, Martina; Hotz, Adriana L; Whitehead, Lachlan; Bahl, Armin; Neuhauss, Stephan C F; Roebroeck, Alard; Stoeckli, Esther T; Lienkamp, Soeren S; Aguzzi, Adriano; Helmchen, Fritjof (2024). Reflective multi-immersion microscope objectives inspired by the Schmidt telescope. Nature Biotechnology, 42(1):65-71.

• 2023

  • Journal Article

    • Rodwell, Vanessa; Patil, Manjiri; Kuht, Helen J; Neuhauss, Stephan C F; Norton, William H J; Thomas, Mervyn G (2023). Zebrafish Optokinetic Reflex: Minimal Reporting Guidelines and Recommendations. Biology, 13(1):4.
    • Letelier, Joaquín; Buono, Lorena; Almuedo-Castillo, María; Zang, Jingjing; Mounieres, Constanza; González-Díaz, Sergio; Polvillo, Rocío; Sanabria-Reinoso, Estefanía; Corbacho, Jorge; Sousa-Ortega, Ana; Del Corral, Ruth Diez; Neuhauss, Stephan C F; Martínez-Morales, Juan R (2023). Mutation of vsx genes in zebrafish highlights the robustness of the retinal specification network. eLife, 12:e85594.
    • Zang, Jingjing; Neuhauss, Stephan C F (2023). Detection of Zebrafish Retinal Proteins by Infrared Western Blotting. Bio-protocol, 13(4):e4618.
    • Gesemann, Matthias; Neuhauss, Stephan C F (2023). Evolution of visual guanylyl cyclases and their activating proteins with respect to clade and species-specific visual system adaptation. Frontiers in Molecular Neuroscience, 16:1131093.
    • Masek, Markus; Zang, Jingjing; Mateos, José María; Garbelli, Marco; Ziegler, Urs; Neuhauss, Stephan C F; Bachmann-Gagescu, Ruxandra (2023). Studying the morphology, composition and function of the photoreceptor primary cilium in zebrafish. Methods in Cell Biology, 175:97-128.

• 2022

  • Journal Article

    • Neuhauss, Stephan C F (2022). Editorial: Insights in methods and model organisms: 2021. Frontiers in Molecular Neuroscience, 15:1104424.
    • Masek, Markus; Etard, Christelle; Hofmann, Claudia; Hülsmeier, Andreas J; Zang, Jingjing; Takamiya, Masanari; Gesemann, Matthias; Neuhauss, Stephan C F; Hornemann, Thorsten; Strähle, Uwe; Bachmann-Gagescu, Ruxandra (2022). Loss of the Bardet-Biedl protein Bbs1 alters photoreceptor outer segment protein and lipid composition. Nature Communications, 13:1282.
    • Durrer, Jan; Agrawal, Prajwal; Ozgul, Ali; Neuhauss, Stephan C F; Nama, Nitesh; Ahmed, Daniel (2022). A robot-assisted acoustofluidic end effector. Nature Communications, 13:6370.
    • Myren‐Svelstad, Sverre; Jamali, Ahmed; Ophus, Sunniva S; D'gama, Percival P; Ostenrath, Anna M; Mutlu, Aytac Kadir; Hoffshagen, Helene Homme; Hotz, Adriana L; Neuhauss, Stephan C F; Jurisch‐Yaksi, Nathalie; Yaksi, Emre (2022). Elevated photic response is followed by a rapid decay and depressed state in ictogenic networks. Epilepsia, 63(10):2543-2560.
    • Özsoy, Çağla; Hotz, Adriana L; Rieser, Nicolas N; Chen, Zhenyue; Deán-Ben, Xosé Luís; Neuhauss, Stephan C F; Razansky, Daniel (2022). Volumetric optoacoustic neurobehavioral tracking of epileptic seizures in freely-swimming zebrafish larvae. Frontiers in Molecular Neuroscience, 15:1004518.
    • Caviglia, Sara; Unterweger, Iris A; Gasiūnaitė, Akvilė; Vanoosthuyse, Alexandre E; Cutrale, Francesco; Trinh, Le A; Fraser, Scott E; Neuhauss, Stephan C F; Ober, Elke A (2022). FRaeppli: a multispectral imaging toolbox for cell tracing and dense tissue analysis in zebrafish. Development, 149(16):dev199615.
    • Tuschl, Karin; White, Richard J; Trivedi, Chintan; Valdivia, Leonardo E; Niklaus, Stephanie; Bianco, Isaac H; Dadswell, Chris; González-Méndez, Ramón; Sealy, Ian M; Neuhauss, Stephan C F; Houart, Corinne; Rihel, Jason; Wilson, Stephen W; Busch-Nentwich, Elisabeth M (2022). Loss of slc39a14 causes simultaneous manganese hypersensitivity and deficiency in zebrafish. Disease Models & Mechanisms, 15(6):dmm044594.
    • Capdeville, Charles; Russo, Linda; Penton, David; Migliavacca, Jessica; Zecevic, Milica; Gries, Alexandre; Neuhauss, Stephan C F; Grotzer, Michael A; Baumgartner, Martin (2022). Spatial proteomics finds CD155 and Endophilin-A1 as mediators of growth and invasion in medulloblastoma. Life Science Alliance, 5(6):e202201380.
    • Hotz, Adriana L; Jamali, Ahmed; Rieser, Nicolas N; Niklaus, Stephanie; Aydin, Ecem; Myren‐Svelstad, Sverre; Lalla, Laetitia; Jurisch‐Yaksi, Nathalie; Yaksi, Emre; Neuhauss, Stephan C F (2022). Loss of glutamate transporter eaat2a leads to aberrant neuronal excitability, recurrent epileptic seizures, and basal hypoactivity. Glia, 70:196-214.

• 2021

  • Journal Article

    • Garbelli, Marco; Neuhauss, Stephan C F (2021). Color vision: Parsing spectral information for opponent color vision in the fish retina. Current Biology, 31(23):R1525-R1527.
    • Glasauer, Stella M K; Triemer, Therese; Neef, Anne B; Neuhauss, Stephan C F; Luedtke, Nathan W (2021). DNA template strand segregation in developing zebrafish. Cell Chemical Biology, 28(11):1638-1647.e4.
    • Schlegel, Domino K; Ramkumar, Srinivasagan; von Lintig, Johannes; Neuhauss, Stephan C F (2021). Disturbed retinoid metabolism upon loss of rlbp1a impairs cone function and leads to subretinal lipid deposits and photoreceptor degeneration in the zebrafish retina. eLife, 10:e71473.
    • Zang, Jingjing; Gesemann, Matthias; Keim, Jennifer; Samardzija, Marijana; Grimm, Christian; Neuhauss, Stephan C F (2021). Circadian regulation of vertebrate cone photoreceptor function. eLife, 10:e68903.
    • Zang, Jingjing; Neuhauss, Stephan C F (2021). Biochemistry and physiology of zebrafish photoreceptors. Pflügers Archiv : European Journal of Physiology, 473(9):1569-1585.
    • Dulla, Kalyan; Slijkerman, Ralph; van Diepen, Hester C; Albert, Silvia; Dona, Margo; et al; Zang, Jingjing; Neuhauss, Stephan C F (2021). Antisense oligonucleotide-based treatment of retinitis pigmentosa caused by USH2A exon 13 mutations. Molecular Therapy, 29(8):2441-2455.
    • Viegas, Filipe O; Neuhauss, Stephan C F (2021). A Metabolic Landscape for Maintaining Retina Integrity and Function. Frontiers in Molecular Neuroscience, 14:656000.

  • Working Paper

    • Masek, Markus; Etard, Christelle; Hofmann, Claudia; Hülsmeier, Andreas J; Zang, Jingjing; Takamiya, Masanari; Gesemann, Matthias; Neuhauss, Stephan; Hornemann, Thorsten; Strähle, Uwe; Bachmann-Gagescu, Ruxandra (2021). The Bardet-Biedl protein Bbs1 controls photoreceptor outer segment protein and lipid composition. ArXiv.org 452166, Cornell University.

• 2020

  • Journal Article

    • Schreier, Verena N; Loehr, Morten O; Deng, Ting; Lattmann, Evelyn; Hajnal, Alex; Neuhauss, Stephan C F; Luedtke, Nathan W (2020). Fluorescent dATP for DNA Synthesis In Vivo. ACS Chemical Biology, 15(11):2996-3003.
    • Gesemann, Matthias; Neuhauss, Stephan C F (2020). Selective Gene Loss of Visual and Olfactory Guanylyl Cyclase Genes Following the Two Rounds of Vertebrate-Specific Whole-Genome Duplications. Genome Biology and Evolution, 12(11):2153-2167.
    • Chen, Zhiyong; Luciani, Alessandro; Mateos, José María; Barmettler, Gery; Giles, Rachel H; Neuhauss, Stephan C F; Devuyst, Olivier (2020). Transgenic zebrafish modeling low-molecular-weight proteinuria and lysosomal storage diseases. Kidney International, 97(6):1150-1163.
    • Latour, Brooke L; Van De Weghe, Julie C; Rusterholz, Tamara D S; Letteboer, Stef J F; Gomez, Arianna; Shaheen, Ranad; Gesemann, Matthias; Karamzade, Arezou; Asadollahi, Mostafa; Barroso-Gil, Miguel; Chitre, Manali; Grout, Megan E; van Reeuwijk, Jeroen; van Beersum, Sylvia E C; Miller, Caitlin V; Dempsey, Jennifer C; Morsy, Heba; Bamshad, Michael J; Nickerson, Deborah A; Neuhauss, Stephan C F; Boldt, Karsten; Ueffing, Marius; Keramatipour, Mohammad; Sayer, John A; Alkuraya, Fowzan S; Bachmann-Gagescu, Ruxandra; Roepman, Ronald; Doherty, Dan (2020). Dysfunction of the ciliary ARMC9/TOGARAM1 protein module causes Joubert syndrome. Journal of Clinical Investigation, 130(8):4423-4439.
    • Latour, Brooke L; Van De Weghe, Julie C; Rusterholz, Tamara D S; Letteboer, Stef J F; Gomez, Arianna; Shaheen, Ranad; Gesemann, Matthias; Karamzade, Arezou; Asadollahi, Mostafa; Barroso-Gil, Miguel; Chitre, Manali; Grout, Megan E; van Reeuwijk, Jeroen; van Beersum, Sylvia E C; Miller, Caitlin V; Dempsey, Jennifer C; Morsy, Heba; Bamshad, Michael J; Nickerson, Deborah A; Neuhauss, Stephan C F; Boldt, Karsten; Ueffing, Marius; Keramatipour, Mohammad; Sayer, John A; Alkuraya, Fowzan S; Bachmann-Gagescu, Ruxandra; Roepman, Ronald; Doherty, Dan (2020). Dysfunction of the ciliary ARMC9/TOGARAM1 protein module causes Joubert syndrome. Journal of Clinical Investigation, 130(8):4423-4439.
    • Ali, Zaheer; Zang, Jingjing; Lagali, Neil; Schmitner, Nicole; Salvenmoser, Willi; Mukwaya, Anthony; Neuhauss, Stephan C F; Jensen, Lasse D; Kimmel, Robin A (2020). Photoreceptor degeneration accompanies vascular changes in a Zebrafish model of diabetic retinopathy. Investigative Ophthalmology & Visual Science [IOVS], 61(2):43.
    • Cianciolo Cosentino, Chiara; Berto, Alessandro; Pelletier, Stéphane; Hari, Michelle; Loffing, Johannes; Neuhauss, Stephan C F; Doye, Valérie (2020). Author correction: Moderate Nucleoporin 133 deficiency leads to glomerular damage in zebrafish. Scientific Reports, 10(1):756.

• 2019

  • Journal Article

    • Schlegel, Domino K; Glasauer, Stella M K; Mateos, José María; Barmettler, Gery; Ziegler, Urs; Neuhauss, Stephan C F (2019). A New Zebrafish Model for CACNA2D4-Dysfunction. Investigative Ophthalmology & Visual Science [IOVS], 60(15):5124-5135.
    • Haug, Marion F; Berger, Manuela; Gesemann, Matthias; Neuhauss, Stephan C F (2019). Differential expression of PKCα and -β in the zebrafish retina. Histochemistry and Cell Biology, 151(6):521-530.
    • Bachmann-Gagescu, Ruxandra; Neuhauss, Stephan C F (2019). The photoreceptor cilium and its diseases. Current Opinion in Genetics & Development, 56:22-33.
    • Cianciolo Cosentino, Chiara; Berto, Alessandro; Pelletier, Stéphane; Hari, Michelle; Loffing, Johannes; Neuhauss, Stephan C F; Doye, Valérie (2019). Moderate Nucleoporin 133 deficiency leads to glomerular damage in zebrafish. Scientific Reports, 9:4750.

  • Working Paper

    • Latour, Brooke L; Van De Weghe, Julie C; Rusterholz, Tamara D S; Letteboer, Stef J F; Gomez, Arianna; Shaheen, Ranad; Gesemann, Matthias; Grout, Megan E; van Reeuwijk, Jeroen; van Beersum, Sylvia E C; Miller, Caitlin V; Dempsey, Jennifer C; Morsy, Heba; Bamshad, Michael J; Nickerson, Deborah A; Neuhauss, Stephan C F; Boldt, Karsten; Ueffing, Marius; Alkuraya, Fowzan S; Bachmann-Gagescu, Ruxandra; Roepman, Ronald; Doherty, Dan (2019). ARMC9 and TOGARAM1 define a Joubert syndrome-associated protein module that regulates axonemal post-translational modifications and cilium stability. bioRxiv 817213, Cold Spring Harbor Laboratory.

• 2018

  • Journal Article

    • Zang, Jingjing; Neuhauss, Stephan C F (2018). The Binding Properties and Physiological Functions of Recoverin. Frontiers in Molecular Neuroscience, 11:473.
    • Ojeda Naharros, Irene; Cristian, Flavia B; Zang, Jingjing; Gesemann, Matthias; Ingham, Philip W; Neuhauss, Stephan C F; Bachmann-Gagescu, Ruxandra (2018). Publisher Correction: The ciliopathy protein TALPID3/KIAA0586 acts upstream of Rab8 activation in zebrafish photoreceptor outer segment formation and maintenance. Scientific Reports, 8:12534.
    • Dona, Margo; Slijkerman, Ralph; Lerner, Kimberly; Broekman, Sanne; Wegner, Jeremy; Howat, Taylor; Peters, Theo; Hetterschijt, Lisette; Boon, Nanda; de Vrieze, Erik; Sorusch, Nasrin; Wolfrum, Uwe; Kremer, Hannie; Neuhauss, Stephan; Zang, Jingjing; Kamermans, Maarten; Westerfield, Monte; Phillips, Jennifer; van Wijk, Erwin (2018). Usherin defects lead to early-onset retinal dysfunction in zebrafish. Experimental Eye Research, 173:148-159.
    • Neuhauss, Stephan C F (2018). Sensory Biology: How to Structure a Tailor-Made Retina. Current Biology, 28(13):R737-R739.
    • Haug, Marion F; Gesemann, Matthias; Berger, Manuela; Neuhauss, Stephan C F (2018). Phylogeny and distribution of protein kinase C variants in the zebrafish. Journal of Comparative Neurology, 526(7):1097-1109.
    • Ojeda Naharros, Irene; Cristian, Flavia B; Zang, Jingjing; Gesemann, Matthias; Ingham, Philip W; Neuhauss, Stephan C F; Bachmann-Gagescu, Ruxandra (2018). The ciliopathy protein TALPID3/KIAA0586 acts upstream of Rab8 activation in zebrafish photoreceptor outer segment formation and maintenance. Scientific Reports, 8:2211.

• 2017

  • Journal Article

    • Ojeda Naharros, Irene; Gesemann, Matthias; Mateos, José María; Barmettler, Gery; Forbes, Austin; Ziegler, Urs; Neuhauss, Stephan C F; Bachmann-Gagescu, Ruxandra (2017). Loss-of-function of the ciliopathy protein Cc2d2a disorganizes the vesicle fusion machinery at the periciliary membrane and indirectly affects Rab8-trafficking in zebrafish photoreceptors. PLoS Genetics, 13(12):e1007150.
    • Mateos, José María; Barmettler, Gery; Doehner, Jana; Ojeda Naharros, Irene; Guhl, Bruno; Neuhauss, Stephan C F; Kaech, Andres; Bachmann-Gagescu, Ruxandra; Ziegler, Urs (2017). Correlative super-resolution and electron microscopy to resolve protein localization in zebrafish retina. Journal of Visualized Experiments, 129:e56113.
    • Stainier, Didier Y R; Raz, Erez; Lawson, Nathan D; Ekker, Stephen C; Burdine, Rebecca D; Eisen, Judith S; Ingham, Philip W; Schulte-Merker, Stefan; Yelon, Deborah; Weinstein, Brant M; Mullins, Mary C; Wilson, Stephen W; Ramakrishnan, Lalita; Amacher, Sharon L; Neuhauss, Stephan C F; Meng, Anming; Mochizuki, Naoki; Panula, Pertti; Moens, Cecilia B (2017). Guidelines for morpholino use in zebrafish. PLoS Genetics, 13(10):e1007000.
    • Niklaus, Stephanie; Neuhauss, Stephan C F (2017). Genetic approaches to retinal research in zebrafish. Journal of Neurogenetics, 31(3):70-87.

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